PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT21551
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 271aa    MW: 29450.1 Da    PI: 8.3725
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT21551genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.46e-28113172159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               ++Dgy+WrKYG+K+ +++++prsY+rC++a +Cpvkkkv+r+aed + ++ tYegeHnh 
  EMT21551 113 VKDGYQWRKYGKKVTRDNPHPRSYFRCAFApSCPVKKKVQRDAEDRSKLVATYEGEHNHA 172
               58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007749.5E-32113173IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.5E-27113173IPR003657WRKY domain
SuperFamilySSF1182909.15E-24113173IPR003657WRKY domain
PfamPF031067.3E-24114171IPR003657WRKY domain
PROSITE profilePS5081124.443115174IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009620Biological Processresponse to fungus
GO:0009751Biological Processresponse to salicylic acid
GO:0010200Biological Processresponse to chitin
GO:1900425Biological Processnegative regulation of defense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MDDGSSCPTD SAGLLPPFAG SPTAEGLEEK LRRVREENRR LAGTLGAILA DRPDLRALAR  60
APASAVATTR APSGSASNAA REEAAGVTVE PQPKVRTVCA RAEPADTDAN LGVKDGYQWR  120
KYGKKVTRDN PHPRSYFRCA FAPSCPVKKK VQRDAEDRSK LVATYEGEHN HAKSPEREFV  180
GNESTGHAGS RPCSVSINPS GCTIRLEDMT NHGSGSRLDL ETIRREVVTP EFQKLLVEKM  240
VNSLKNDADF MHALTYAVAE RILENIPARL S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-191131751475WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956832.13e-97PREDICTED: WRKY transcription factor 18-like
TrEMBLM8CEE70.0M8CEE7_AEGTA; Putative WRKY transcription factor 40
STRINGSi030794m8e-97(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129212834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.22e-42WRKY DNA-binding protein 18